
Physics has been working in the top-down direction. That is not how you find emergent properties, it is an attempt to explain things from the properties they seem to possess.
For instance, the relatively gigantic boson is somehow "sub-atomic", to particle physicists. Whereas I think it that particles emerge from the breakdown of the bosonic field, and when we smash together the particles which reveal the boson, we are briefly seeing what happens when we have put them back together. See my comment here https://news.ycombinator.com/item?id=21039542
A very good primer on this is "Intensive Science and Virtual Philosophy" by Manuel DeLanda.
http://www.amazon.com/Intensive-Science-Virtual-Philosophy-C...